I tried to install pymol using macports (after trying to build from the source code failed):
sudo port install pymol
It did install it, giving me two warnings:
Warning: xcodebuild exists but failed to execute
Warning: Xcode does not appear to be installed; most ports will likely fail to build.
I am able to run pymol, but it crashes after a minute or so. Also, the top window does not show any buttons:
The error message is:
Is this because of the warnings port
gave me at the very beginning, or is there something else at work here?
Best Answer
In case this ever helps someone, this will make it compile and load.
First Uninstall Pymol
Then:
This is described here:
http://www.ub.edu/cbdd/?q=content/installing-pymol-macports