About your requirements, Iceweasel is the supported Firefox derivative (fork), I'm currently running debian as my desktop OS at work and use iceweasel every day, no problem. Gnome3, I think it'll be available on the next stable release, BTW what release are you running? Squeeze? If so I think (IIRC) Wheezy will have it. And finally, about graphics performance/quality, that depends a lot on your graphics card and its driver, but if you think of it like having transparencies, windows closing with fancy effects and so on, you'll need a moderm desktop or compiz (work with gnome2) which I think its available on stable (wheeze).
I have modified a bit your sources.list for wheeze, do you mind to test it and report back?
deb http://http.us.debian.org/debian/ squeeze contrib non-free main
deb-src http://http.us.debian.org/debian/ squeeze main
deb http://security.debian.org/ squeeze/updates main non-free contrib
deb-src http://http.us.debian.org/debian/ squeeze/updates main
# squeeze-updates, previously known as 'volatile'
deb http://mirror.cse.iitk.ac.in/debian/ squeeze-updates main non-free contrib
deb-src http://mirror.cse.iitk.ac.in/debian/ squeeze-updates main non-free contrib
# 3rd party repositories
deb http://packages.dotdeb.org squeeze all
deb-src http://packages.dotdeb.org squeeze all
deb http://www.deb-multimedia.org squeeze main non-free
If you happen to be using wheezy or sid you'll have to change all squeeze ocurrences for the one you're using.
Please, backup your sources.list before replacing it, then test it as follows:
Refresh caches
# apt-get update
Search package
# apt-cache vlc
Install package
# apt-get install <package_name>
If find trouble, please report back with output for those three commands, or at least for the first and last.
Also, if you are already using Wheezy or sid, forget what I said about Gnome3 not being available, it should be there but wheezy is yet to be release and sid is always the development branch.
The sources.list file is actually several files: /etc/apt/sources.list, and files called something.list in the directory /etc/apt/sources.list.d.
This message tells you that you have duplicate entries in those files: you have several lines pointing to the same source. This is a warning: it isn't wrong per se, but it indicates that your configuration is probably not right. Look for lines starting with deb http://http.us.debian.org/debian wheezy in the files I mentioned above. You have multiple such lines containing contrib and non-free. Either remove the redundant lines or correct them if you meant for them to point to something else.
Best Answer
You answered your own question, pepperflashplugin-nonfree is the way to go.
In your case, you need to enable the wheezy-backports repository, adding the following line to your sources.list:
Then, update the list of available packages with
apt-get update, and finally install it with