Mysql – How to prevent “ibdata files do not match the log sequence number”

It is sort of yes and no. Why would I say both?

There are still some transactional data embedded in the old ib_logfiles in conjunction with the ibdata1 file. (See pictorial representation)

What you should have done is this:

mysql -u... -p... -ANe"SET GLOBAL innodb_fast_shutdown = 0"
/etc/init.d/mysql.server stop
mv ib_logfile0 ib_logfile0.OLD
mv ib_logfile0 ib_logfile0.OLD
/etc/init.d/mysql.server start

If you did not know of disabling innodb_fast_shutdown, ther you steps should have been

/etc/init.d/mysql.server stop
/etc/init.d/mysql.server start
/etc/init.d/mysql.server stop
mv ib_logfile0 ib_logfile0.OLD
mv ib_logfile0 ib_logfile0.OLD
/etc/init.d/mysql.server start

Doing either of these coordinate the purging of all uncommitted writes to tables and indexes. Just looking at the error log, I think you dodged a bullet in this instance. In future, please follow this protocol.

If you are not sure either way, you could put back the old log files, set the old size of innodb_log_file_size, restart mysql. Then, start the process over again as I prescribed above.

What was suggested to you thus far is what can be done to bring the database to a consistent state.

Here is what you need to know about InnoDB.

First of all here is the InnoDB Architecture in Pictorial Form

Look at the Picture. What components are essentially for InnoDB's self healing (sounds better that crash recovery)?

• The Double Write Buffer has the cache of changed blocks to be used for recovery.
• The Insert Buffer handles updates to nonunique indexes
• The InnoDB transaction logs (ib_logfile0,ib_logfile1) contain Redo Playback Info also used in recovery.
• There are undo logs (1023 of them, the maximum number of concurrent transactions)

You need three files for recovery

• ibdata1
• ib_logfile0
• ib_logfile1

The whole datadir folder (/var/lib/mysql) needs to be restored from the same moment in time it was being backed up. If there are no physical copies of datadir from the same moment in time, then log sequence numbers for future transactions can never be referenced correctly.

If you do not trust your host in this matter, perhaps you can get MySQL started with innodb_force_recovery set to an appropriate value.

Here are the values from the MySQL Documentation

1 (SRV_FORCE_IGNORE_CORRUPT)

Lets the server run even if it detects a corrupt page. Tries to make SELECT * FROM tbl_name jump over corrupt index records and pages, which helps in dumping tables.

2 (SRV_FORCE_NO_BACKGROUND)

Prevents the master thread and any purge threads from running. If a crash would occur during the purge operation, this recovery value prevents it.

3 (SRV_FORCE_NO_TRX_UNDO)

Does not run transaction rollbacks after crash recovery.

4 (SRV_FORCE_NO_IBUF_MERGE)

Prevents insert buffer merge operations. If they would cause a crash, does not do them. Does not calculate table statistics.

5 (SRV_FORCE_NO_UNDO_LOG_SCAN)

Does not look at undo logs when starting the database: InnoDB treats even incomplete transactions as committed.

6 (SRV_FORCE_NO_LOG_REDO)

Does not do the redo log roll-forward in connection with recovery.

Once you select the value you want, start up MySQL with it. Then, perform a mysqldump of all the data. Keep that mysqldump somewhere.

• I would set innodb_force_recovery to 6. Restart mysql. Do the mysqldump (MyData6.sql)
• Change it to 5. Restart mysql. Do the mysqldump (MyData5.sql)
• Change it to 4. Restart mysql. Do the mysqldump (MyData4.sql)
• Change it to 3. Restart mysql. Do the mysqldump (MyData3.sql)
• Change it to 2. Restart mysql. Do the mysqldump (MyData2.sql)
• Change it to 1. Restart mysql. Do the mysqldump (MyData1.sql)

You now have 6 snapshots of the data based on how much could be recovered. You would then have to load each MySQLDump into a separate instance of MySQL. You would have to then peruse the data and determine if enough of the data has been recovered. Percona has a Data Recovery Toolkit that would do all this way more efficiently than I am saying it.

My answer is simply a poor man's approach to this.

I hope this helps !!!